CDS

Accession Number TCMCG057C08387
gbkey CDS
Protein Id XP_018467691.1
Location join(34167633..34168463,34168572..34168634,34168723..34168802,34168885..34168897)
Gene LOC108839425
GeneID 108839425
Organism Raphanus sativus

Protein

Length 328aa
Molecule type protein
Topology linear
Data_file_division PLN
dblink BioProject:PRJNA344915
db_source XM_018612189.1
Definition PREDICTED: vacuolar protein sorting-associated protein 54, chloroplastic-like [Raphanus sativus]

EGGNOG-MAPPER Annotation

COG_category U
Description Vps54-like protein
KEGG_TC -
KEGG_Module -
KEGG_Reaction -
KEGG_rclass -
BRITE ko00000        [VIEW IN KEGG]
ko01009        [VIEW IN KEGG]
ko04131        [VIEW IN KEGG]
KEGG_ko ko:K17600        [VIEW IN KEGG]
EC -
KEGG_Pathway -
GOs GO:0000139        [VIEW IN EMBL-EBI]
GO:0000149        [VIEW IN EMBL-EBI]
GO:0000938        [VIEW IN EMBL-EBI]
GO:0001894        [VIEW IN EMBL-EBI]
GO:0003674        [VIEW IN EMBL-EBI]
GO:0005488        [VIEW IN EMBL-EBI]
GO:0005515        [VIEW IN EMBL-EBI]
GO:0005575        [VIEW IN EMBL-EBI]
GO:0005622        [VIEW IN EMBL-EBI]
GO:0005623        [VIEW IN EMBL-EBI]
GO:0005634        [VIEW IN EMBL-EBI]
GO:0005654        [VIEW IN EMBL-EBI]
GO:0005737        [VIEW IN EMBL-EBI]
GO:0005794        [VIEW IN EMBL-EBI]
GO:0005802        [VIEW IN EMBL-EBI]
GO:0006810        [VIEW IN EMBL-EBI]
GO:0006892        [VIEW IN EMBL-EBI]
GO:0006896        [VIEW IN EMBL-EBI]
GO:0006996        [VIEW IN EMBL-EBI]
GO:0007010        [VIEW IN EMBL-EBI]
GO:0007034        [VIEW IN EMBL-EBI]
GO:0007041        [VIEW IN EMBL-EBI]
GO:0008150        [VIEW IN EMBL-EBI]
GO:0009507        [VIEW IN EMBL-EBI]
GO:0009536        [VIEW IN EMBL-EBI]
GO:0009987        [VIEW IN EMBL-EBI]
GO:0012505        [VIEW IN EMBL-EBI]
GO:0016020        [VIEW IN EMBL-EBI]
GO:0016043        [VIEW IN EMBL-EBI]
GO:0016192        [VIEW IN EMBL-EBI]
GO:0016197        [VIEW IN EMBL-EBI]
GO:0016482        [VIEW IN EMBL-EBI]
GO:0019905        [VIEW IN EMBL-EBI]
GO:0031090        [VIEW IN EMBL-EBI]
GO:0031410        [VIEW IN EMBL-EBI]
GO:0031974        [VIEW IN EMBL-EBI]
GO:0031981        [VIEW IN EMBL-EBI]
GO:0031982        [VIEW IN EMBL-EBI]
GO:0031984        [VIEW IN EMBL-EBI]
GO:0032501        [VIEW IN EMBL-EBI]
GO:0032588        [VIEW IN EMBL-EBI]
GO:0032991        [VIEW IN EMBL-EBI]
GO:0040008        [VIEW IN EMBL-EBI]
GO:0042147        [VIEW IN EMBL-EBI]
GO:0042592        [VIEW IN EMBL-EBI]
GO:0043226        [VIEW IN EMBL-EBI]
GO:0043227        [VIEW IN EMBL-EBI]
GO:0043229        [VIEW IN EMBL-EBI]
GO:0043231        [VIEW IN EMBL-EBI]
GO:0043233        [VIEW IN EMBL-EBI]
GO:0044422        [VIEW IN EMBL-EBI]
GO:0044424        [VIEW IN EMBL-EBI]
GO:0044428        [VIEW IN EMBL-EBI]
GO:0044431        [VIEW IN EMBL-EBI]
GO:0044433        [VIEW IN EMBL-EBI]
GO:0044444        [VIEW IN EMBL-EBI]
GO:0044446        [VIEW IN EMBL-EBI]
GO:0044464        [VIEW IN EMBL-EBI]
GO:0045103        [VIEW IN EMBL-EBI]
GO:0045104        [VIEW IN EMBL-EBI]
GO:0046907        [VIEW IN EMBL-EBI]
GO:0048193        [VIEW IN EMBL-EBI]
GO:0048471        [VIEW IN EMBL-EBI]
GO:0048871        [VIEW IN EMBL-EBI]
GO:0048872        [VIEW IN EMBL-EBI]
GO:0048873        [VIEW IN EMBL-EBI]
GO:0050789        [VIEW IN EMBL-EBI]
GO:0050879        [VIEW IN EMBL-EBI]
GO:0050881        [VIEW IN EMBL-EBI]
GO:0051179        [VIEW IN EMBL-EBI]
GO:0051234        [VIEW IN EMBL-EBI]
GO:0051641        [VIEW IN EMBL-EBI]
GO:0051649        [VIEW IN EMBL-EBI]
GO:0060052        [VIEW IN EMBL-EBI]
GO:0060249        [VIEW IN EMBL-EBI]
GO:0065007        [VIEW IN EMBL-EBI]
GO:0065008        [VIEW IN EMBL-EBI]
GO:0070013        [VIEW IN EMBL-EBI]
GO:0071840        [VIEW IN EMBL-EBI]
GO:0097708        [VIEW IN EMBL-EBI]
GO:0098588        [VIEW IN EMBL-EBI]
GO:0098791        [VIEW IN EMBL-EBI]
GO:0099023        [VIEW IN EMBL-EBI]

Sequence

CDS:  
ATGGATTCGCATCCTTCCTTGATCGGAAGGTCCATCGGCAACAGCAACCGATCCAGCGTAGATCTCGGCCGTTCAACACCTTCCTCCCCTTCCCCCTCATCGCTAACCAAATCCATCTCCGATGCGAGCAGCCAGAGCCTCTCCTCGATCCTCAACAACCCCCACGGAGGCAAATCCGGCGTCTACGGCACCGACGCCTCCTGGGTCGGCTGGTGGTCCTCCTCCACCTCCGTGGCTCCCTCCGAGTTCGCCCCCGTCGCTTCCGCGAAGCTCCCCGGGTCGGACCTCGCCAGATCCGACTTCCACGGCTACGTCTCCTCGATCTCCGACTCTCACGCCAGGTTCGAGGACATCATCAACCACGCCAGGGAAGAGAGCTCGGGGCTCGATCAGGAGAGCCACGTGTCCGGTCTGGCTTCGTGTCTCCGCGAGGTCCCTTCGCTCTACTTCAAGGAGGATTTCGCGTTGGAGGACGGGGCCACGTTTCGCTCCGCGTGTCCCTTTTCGAGCTTGACGGAGAATCTGGCGCTTCAGGAGAAGCTGTCGCAGTATCTCGATGTGGTGGAGATGCATCTCGTGAAGGAGATCTCGGTGAGGTCGGATTCGTTCTTCGAGGCGCAGGGGCAGTTGCAGGATTTGAATGGGAAGATTGTTGAGGGGTGTAGTAGGATTCGTGAGTTGAAAGAGACGATTCGGCTTCTGGATAGGAATCTGGTGGATTCGGCTCGGCAGATTCAGGAGCTGAGCTCGACTAGGATTAATATGTTGGAGCTGCAGCGTAAACTGAGGGTCATTTTGTATGTTAACCAAGCTCTCTCTGCACTCAAATTGCTTGTTGCGTCAGCAGATTGTGCTGGAGCGTTGGATATAACTGACGATCTCCAGAACTTGTTGGCTGGGGATGAGCTAACTGGTCTACATTGCTTCCGTCATCTTCGAGATCATGTCACTACTTCCATAGAATCCATAAACAGGAGAATCGTTTAA
Protein:  
MDSHPSLIGRSIGNSNRSSVDLGRSTPSSPSPSSLTKSISDASSQSLSSILNNPHGGKSGVYGTDASWVGWWSSSTSVAPSEFAPVASAKLPGSDLARSDFHGYVSSISDSHARFEDIINHAREESSGLDQESHVSGLASCLREVPSLYFKEDFALEDGATFRSACPFSSLTENLALQEKLSQYLDVVEMHLVKEISVRSDSFFEAQGQLQDLNGKIVEGCSRIRELKETIRLLDRNLVDSARQIQELSSTRINMLELQRKLRVILYVNQALSALKLLVASADCAGALDITDDLQNLLAGDELTGLHCFRHLRDHVTTSIESINRRIV